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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4424177 chr7:140167511 A/G LOC441455 chr9:99488103-99489749:+ 0.48 6.5 2.02E-10 Box Plot
THCA rs4426925 chr5:46055601 G/C LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.34E-15 Box Plot
THCA rs4426926 chr5:45994343 A/G LOC647121 chr1:121260910-121313686:+ 0.34 7.03 7.28E-12 Box Plot
THCA rs4426958 chr5:49495244 G/C LOC647121 chr1:121260910-121313686:+ -0.37 -7.91 1.74E-14 Box Plot
THCA rs4427086 chr7:140178420 G/A LOC441455 chr9:99488103-99489749:+ 0.47 6.1 2.2E-9 Box Plot
THCA rs4428422 chr5:46017318 T/C LOC647121 chr1:121260910-121313686:+ 0.36 7.49 3.41E-13 Box Plot
THCA rs4431354 chr5:46051386 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.17 2.77E-15 Box Plot
THCA rs4431522 chr7:140178327 G/C LOC441455 chr9:99488103-99489749:+ 0.45 6.03 3.29E-9 Box Plot
THCA rs4433149 chr8:10249268 A/T SGK223 chr8:8175258-8244008:- 0.41 7.95 1.36E-14 Box Plot
THCA rs4434586 chr8:11212812 C/G SGK223 chr8:8175258-8244008:- -0.36 -6.63 9.19E-11 Box Plot
THCA rs4437726 chr9:141064639 C/G TUBB4Q chr4:190903679-190906024:- -0.8 -15.5 3.27E-44 Box Plot
THCA rs4438241 chr14:66746033 C/T ATP6V1D chr14:67761088-67826982:- 0.31 6.47 2.43E-10 Box Plot
THCA rs4441015 chr11:49027070 A/G FOLH1B chr11:89372395-89431886:+ 0.46 6.75 4.22E-11 Box Plot
THCA rs4441330 chr17:18562720 C/T LOC162632 chr17:16614993-16707819:+ 0.34 5.97 4.56E-9 Box Plot
THCA rs4441886 chr5:46063136 G/A LOC647121 chr1:121260910-121313686:+ -0.38 -8.13 3.75E-15 Box Plot